Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
NKX6-2Q9C056 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 HERC2P10-201ENST00000570209 2393 ntBASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AC115284.2-201ENST00000624646 2054 ntBASIC11.85□□□□□ -0.51
NKX6-2Q9C056 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AC012640.2-201ENST00000561606 901 ntBASIC11.85□□□□□ -0.51
NKX6-2Q9C056 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AC008267.7-201ENST00000624570 1194 ntBASIC11.85□□□□□ -0.51
NKX6-2Q9C056 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 AKAP8P1-201ENST00000434743 1349 ntBASIC11.85□□□□□ -0.51
NKX6-2Q9C056 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.85□□□□□ -0.51
NKX6-2Q9C056 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.84□□□□□ -0.51
NKX6-2Q9C056 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 HLA-H-201ENST00000383620 1096 ntBASIC11.84□□□□□ -0.51
NKX6-2Q9C056 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 FAM197Y8-203ENST00000450145 560 ntBASIC11.84□□□□□ -0.51
NKX6-2Q9C056 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 RARRES2P8-201ENST00000566335 367 ntBASIC11.84□□□□□ -0.51
NKX6-2Q9C056 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.84□□□□□ -0.51
NKX6-2Q9C056 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms