Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AC005229.1-201ENST00000392885 409 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 KLF2P2-201ENST00000416807 1039 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 EIF3FP3-201ENST00000434851 1086 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AL355864.2-201ENST00000447420 863 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 FAM8A2P-201ENST00000528813 1142 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 SORD2P-201ENST00000558556 1069 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 GPR182-203ENST00000622922 591 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AP001002.3-201ENST00000623482 206 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 TUBB8P4-201ENST00000511806 1324 ntBASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 BRWD1P1-201ENST00000401091 371 ntBASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 MIR1908-201ENST00000410394 80 ntBASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 ACTBP11-201ENST00000436287 1126 ntBASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 CSF2RBP1-201ENST00000447905 391 ntBASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 KHSRPP1-201ENST00000427983 1768 ntBASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXP3Q9BZS1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXP3Q9BZS1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXP3Q9BZS1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
FOXP3Q9BZS1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXP3Q9BZS1 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXP3Q9BZS1 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXP3Q9BZS1 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms