Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC010319.3-201ENST00000597028 470 ntBASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 AC139712.1-201ENST00000378256 1875 ntBASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLHC1Q8NHS4 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AL138709.1-201ENST00000614840 1693 ntBASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AC068587.3-201ENST00000526613 355 ntBASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 PTP4A1P2-201ENST00000546033 454 ntBASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AC103988.2-201ENST00000561804 725 ntBASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AP001002.3-201ENST00000623482 206 ntBASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 KRT8P24-201ENST00000560290 1559 ntBASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLHC1Q8NHS4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 MEX3B-202ENST00000558133 4333 ntBASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 TERF1P3-201ENST00000505638 1227 ntBASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 FTLP10-202ENST00000505798 471 ntBASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.06□□□□□ -0.16
CLHC1Q8NHS4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms