Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 PPP1R2P4-201ENST00000424051 595 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 RN7SL23P-201ENST00000484055 275 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 RNA5SP406-201ENST00000516106 112 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AC226150.1-201ENST00000544259 466 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AC104506.1-201ENST00000609247 429 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 LINC00244-201ENST00000625073 613 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AC021305.1-201ENST00000520656 1514 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 AC064801.2-201ENST00000625052 1303 ntBASIC15.43■□□□□ 0.06
NPAS4Q8IUM7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 BX679664.3-201ENST00000414070 555 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC024293.1-201ENST00000467930 498 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC113935.1-201ENST00000471722 555 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC026410.1-201ENST00000507366 1101 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC095040.1-201ENST00000513286 675 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC006158.1-201ENST00000610661 249 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC073592.2-201ENST00000623062 780 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AL451007.2-201ENST00000632004 563 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 AC067931.2-201ENST00000623655 2003 ntBASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NPAS4Q8IUM7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms