Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC011477.7-201ENST00000617163 1440 ntBASIC18.79■□□□□ 0.6
COL16A1Q07092 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.79■□□□□ 0.6
COL16A1Q07092 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL16A1Q07092 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL16A1Q07092 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.79■□□□□ 0.6
COL16A1Q07092 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC18.79■□□□□ 0.6
COL16A1Q07092 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
COL16A1Q07092 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL16A1Q07092 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
COL16A1Q07092 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL16A1Q07092 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
COL16A1Q07092 DLX4-206ENST00000611342 1662 ntBASIC18.79■□□□□ 0.6
COL16A1Q07092 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL16A1Q07092 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
COL16A1Q07092 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL16A1Q07092 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL16A1Q07092 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.79■□□□□ 0.6
COL16A1Q07092 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.79■□□□□ 0.6
COL16A1Q07092 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COL16A1Q07092 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL16A1Q07092 AL031577.1-201ENST00000339867 399 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 AL121949.1-201ENST00000402043 968 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 AC041040.1-201ENST00000425197 460 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 AC074019.1-201ENST00000428788 1096 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 RN7SL677P-201ENST00000466970 319 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL16A1Q07092 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL16A1Q07092 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.78■□□□□ 0.6
COL16A1Q07092 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 MIR1307-201ENST00000408840 149 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC18.78■□□□□ 0.6
COL16A1Q07092 NDUFB2P1-201ENST00000506966 295 ntBASIC18.78■□□□□ 0.6
COL16A1Q07092 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL16A1Q07092 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.78■□□□□ 0.6
COL16A1Q07092 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.77■□□□□ 0.6
COL16A1Q07092 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 AC136621.1-201ENST00000624017 2304 ntBASIC18.77■□□□□ 0.6
COL16A1Q07092 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.77■□□□□ 0.6
COL16A1Q07092 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC18.77■□□□□ 0.6
COL16A1Q07092 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COL16A1Q07092 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC18.77■□□□□ 0.6
COL16A1Q07092 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 LTB4R2-202ENST00000528054 3092 ntBASIC18.77■□□□□ 0.6
COL16A1Q07092 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC18.77■□□□□ 0.6
COL16A1Q07092 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL16A1Q07092 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.77■□□□□ 0.6
COL16A1Q07092 AC099552.4-201ENST00000624248 949 ntBASIC18.77■□□□□ 0.6
COL16A1Q07092 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL16A1Q07092 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL16A1Q07092 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL16A1Q07092 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.77■□□□□ 0.59
COL16A1Q07092 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.77■□□□□ 0.59
COL16A1Q07092 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
COL16A1Q07092 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COL16A1Q07092 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.76■□□□□ 0.59
COL16A1Q07092 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.76■□□□□ 0.59
COL16A1Q07092 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COL16A1Q07092 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 RBMXP1-201ENST00000408004 1191 ntBASIC18.76■□□□□ 0.59
COL16A1Q07092 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
COL16A1Q07092 RN7SL479P-201ENST00000472003 300 ntBASIC18.76■□□□□ 0.59
COL16A1Q07092 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC18.76■□□□□ 0.59
COL16A1Q07092 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC18.76■□□□□ 0.59
COL16A1Q07092 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC18.76■□□□□ 0.59
COL16A1Q07092 RN7SL134P-201ENST00000579756 303 ntBASIC18.76■□□□□ 0.59
COL16A1Q07092 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC18.76■□□□□ 0.59
COL16A1Q07092 AC245369.8-201ENST00000636589 306 ntBASIC18.76■□□□□ 0.59
COL16A1Q07092 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.76■□□□□ 0.59
COL16A1Q07092 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms