Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
AP1S1P61966 AL591471.1-201ENST00000621855 229 ntBASIC14.65□□□□□ -0.06
AP1S1P61966 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S1P61966 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
AP1S1P61966 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
AP1S1P61966 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S1P61966 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
AP1S1P61966 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
AP1S1P61966 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
AP1S1P61966 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
AP1S1P61966 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S1P61966 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
AP1S1P61966 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
AP1S1P61966 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S1P61966 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
AP1S1P61966 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
AP1S1P61966 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S1P61966 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S1P61966 AKR7A2P1-201ENST00000460134 915 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.64□□□□□ -0.07
AP1S1P61966 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S1P61966 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.64□□□□□ -0.07
AP1S1P61966 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S1P61966 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 MIR3615-201ENST00000581999 87 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.64□□□□□ -0.07
AP1S1P61966 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 AL645939.5-201ENST00000606834 243 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AC026740.1-201ENST00000607068 791 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 MIR6787-201ENST00000616675 61 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AC090386.2-201ENST00000623010 1039 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AC007191.1-201ENST00000623179 2995 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AC100757.4-201ENST00000626934 759 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 AC092299.1-201ENST00000632679 757 ntBASIC14.64□□□□□ -0.07
AP1S1P61966 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP1S1P61966 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
AP1S1P61966 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
AP1S1P61966 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.64□□□□□ -0.07
AP1S1P61966 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP1S1P61966 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
AP1S1P61966 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.63□□□□□ -0.07
AP1S1P61966 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP1S1P61966 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms