Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 AGAP10P-201ENST00000454844 2418 ntBASIC14.4□□□□□ -0.1
CDKN2DP55273 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 AC112492.5-201ENST00000421897 457 ntBASIC14.4□□□□□ -0.1
CDKN2DP55273 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 CR383656.12-201ENST00000549567 513 ntBASIC14.4□□□□□ -0.1
CDKN2DP55273 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.4□□□□□ -0.1
CDKN2DP55273 AC012645.4-201ENST00000610691 1061 ntBASIC14.4□□□□□ -0.1
CDKN2DP55273 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDKN2DP55273 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 AL365209.1-201ENST00000624418 6473 ntBASIC14.4□□□□□ -0.1
CDKN2DP55273 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.4□□□□□ -0.1
CDKN2DP55273 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDKN2DP55273 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
CDKN2DP55273 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.39□□□□□ -0.11
CDKN2DP55273 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.39□□□□□ -0.11
CDKN2DP55273 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.39□□□□□ -0.11
CDKN2DP55273 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.39□□□□□ -0.11
CDKN2DP55273 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 AC132192.2-201ENST00000596206 1147 ntBASIC14.39□□□□□ -0.11
CDKN2DP55273 LINC02084-201ENST00000606069 1096 ntBASIC14.39□□□□□ -0.11
CDKN2DP55273 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.39□□□□□ -0.11
CDKN2DP55273 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms