Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 AC132192.2-201ENST00000596206 1147 ntBASIC12.53□□□□□ -0.4
CCL1P22362 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.53□□□□□ -0.4
CCL1P22362 AL136301.1-201ENST00000615830 422 ntBASIC12.53□□□□□ -0.4
CCL1P22362 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL1P22362 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL1P22362 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL1P22362 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.53□□□□□ -0.4
CCL1P22362 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL1P22362 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL1P22362 KRT8P4-201ENST00000509735 1454 ntBASIC12.53□□□□□ -0.4
CCL1P22362 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL1P22362 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL1P22362 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL1P22362 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CCL1P22362 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL1P22362 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
CCL1P22362 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL1P22362 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CCL1P22362 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL1P22362 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 AL137784.3-201ENST00000623858 2288 ntBASIC12.52□□□□□ -0.41
CCL1P22362 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 AL512384.1-201ENST00000406683 331 ntBASIC12.52□□□□□ -0.41
CCL1P22362 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 AC112492.5-201ENST00000421897 457 ntBASIC12.52□□□□□ -0.41
CCL1P22362 TMEM14DP-201ENST00000422205 345 ntBASIC12.52□□□□□ -0.41
CCL1P22362 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 AK2P2-201ENST00000439142 405 ntBASIC12.52□□□□□ -0.41
CCL1P22362 INE1-201ENST00000456273 945 ntBASIC12.52□□□□□ -0.41
CCL1P22362 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.52□□□□□ -0.41
CCL1P22362 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL1P22362 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL1P22362 PPY2P-201ENST00000582808 702 ntBASIC12.52□□□□□ -0.41
CCL1P22362 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.52□□□□□ -0.41
CCL1P22362 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 NCLP1-201ENST00000445357 1963 ntBASIC12.52□□□□□ -0.41
CCL1P22362 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL1P22362 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CCL1P22362 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL1P22362 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL1P22362 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms