Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 DOC2GP-204ENST00000639052 2548 ntBASIC17.64■□□□□ 0.41
RGPD3A6NKT7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 GUCY2EP-203ENST00000531117 1918 ntBASIC17.64■□□□□ 0.41
RGPD3A6NKT7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RGPD3A6NKT7 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 HMGA1P1-201ENST00000415560 1062 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 JPT1-205ENST00000470924 663 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 RPL29P2-202ENST00000498671 657 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AC127002.1-201ENST00000619123 455 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 YBX1P3-201ENST00000468366 909 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 KRT18P42-201ENST00000505048 1255 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AL139317.2-201ENST00000556998 158 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 MIR6165-201ENST00000614803 84 ntBASIC17.63■□□□□ 0.41
RGPD3A6NKT7 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC17.63■□□□□ 0.41
RGPD3A6NKT7 AC215219.1-201ENST00000400706 1817 ntBASIC17.62■□□□□ 0.41
RGPD3A6NKT7 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 MIR181D-201ENST00000384853 137 ntBASIC17.62■□□□□ 0.41
RGPD3A6NKT7 RBMXP1-201ENST00000408004 1191 ntBASIC17.62■□□□□ 0.41
RGPD3A6NKT7 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 AC009812.1-201ENST00000605948 1059 ntBASIC17.62■□□□□ 0.41
RGPD3A6NKT7 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 KRT8P25-201ENST00000473150 1456 ntBASIC17.62■□□□□ 0.41
RGPD3A6NKT7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RGPD3A6NKT7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms