Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCDC187A0A096LP49 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC013268.4-201ENST00000637413 2228 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC022532.1-201ENST00000624563 1728 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 TEKT4P2-202ENST00000559466 1312 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 GUSBP10-201ENST00000417412 665 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ERP29P1-201ENST00000442902 706 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ALG1L6P-201ENST00000515248 758 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 HERC2P11-201ENST00000562845 725 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC100756.2-201ENST00000569537 736 ntBASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCDC187A0A096LP49 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AP002353.1-201ENST00000528257 1599 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 MIR1227-201ENST00000408484 88 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 DPY19L2P5-201ENST00000456300 331 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 RPL18AP8-201ENST00000486071 528 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 RNA5SP417-201ENST00000516459 108 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC027237.1-201ENST00000560942 655 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC140658.4-201ENST00000561990 352 ntBASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.75□□□□□ -0.21
CCDC187A0A096LP49 AC005357.2-202ENST00000590507 1060 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms