Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 RAB28P2-201ENST00000454299 641 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AC106868.1-201ENST00000505272 992 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AL391280.1-201ENST00000506969 1062 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 RASA2-IT1-201ENST00000507770 612 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AP005131.7-201ENST00000610087 611 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AC087392.5-201ENST00000612517 489 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AC022960.3-201ENST00000619794 441 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AC022306.3-201ENST00000619930 550 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 AL513185.3-201ENST00000433335 1300 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 NORAD-201ENST00000565493 5339 ntBASIC14.1□□□□□ -0.15
LHX6Q9UPM6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LHX6Q9UPM6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC011477.6-201ENST00000604980 1927 ntBASIC14.09□□□□□ -0.15
LHX6Q9UPM6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC126755.1-201ENST00000525846 6405 ntBASIC14.09□□□□□ -0.15
LHX6Q9UPM6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 NPM1P31-201ENST00000399021 764 ntBASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 LYPLA2P1-203ENST00000447689 696 ntBASIC14.09□□□□□ -0.15
LHX6Q9UPM6 RN7SL258P-201ENST00000478664 300 ntBASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AL139021.1-201ENST00000556734 436 ntTSL 3 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 MIR4472-1-201ENST00000584349 80 ntBASIC14.09□□□□□ -0.15
LHX6Q9UPM6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.09□□□□□ -0.15
LHX6Q9UPM6 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms