Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AL008707.1-201ENST00000422498 534 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC011742.3-201ENST00000439053 820 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 TUBB8P8-201ENST00000458717 1058 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RN7SL163P-201ENST00000583100 276 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AP001505.2-201ENST00000616815 443 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC011840.2-201ENST00000563063 1520 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 AC092053.3-201ENST00000641308 4975 ntBASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NPIPA1Q9UND3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA1Q9UND3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 DPM3-202ENST00000368399 517 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 AC104073.2-201ENST00000453737 312 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 AC105129.2-201ENST00000559536 390 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 MIR3619-201ENST00000579667 83 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 AC022748.3-201ENST00000621828 275 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 AC004923.1-202ENST00000642106 209 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 TUBBP5-203ENST00000508529 1334 ntBASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA1Q9UND3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC140479.7-201ENST00000636301 2332 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC004899.1-201ENST00000424687 1714 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 AC022217.1-201ENST00000521069 738 ntBASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA1Q9UND3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms