Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VPS29Q9UBQ0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.02□□□□□ -0.16
VPS29Q9UBQ0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 COX5BP8-201ENST00000416911 349 ntBASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 NME2P1-201ENST00000426182 414 ntBASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 CICP12-201ENST00000455801 843 ntBASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AC005586.2-201ENST00000563946 837 ntBASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AL358472.3-201ENST00000608147 415 ntBASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS29Q9UBQ0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 CICP4-201ENST00000447359 2812 ntBASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 KRT8P4-201ENST00000509735 1454 ntBASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AHCYP2-201ENST00000430630 1300 ntBASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.01□□□□□ -0.17
VPS29Q9UBQ0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms