Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 AC009118.2-201ENST00000613275 655 ntBASIC13.84□□□□□ -0.19
VAPAQ9P0L0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 AC064801.2-201ENST00000625052 1303 ntBASIC13.84□□□□□ -0.19
VAPAQ9P0L0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VAPAQ9P0L0 AL391825.1-201ENST00000457671 1364 ntBASIC13.83□□□□□ -0.19
VAPAQ9P0L0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
VAPAQ9P0L0 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AC126335.2-201ENST00000623362 4637 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 FTLP10-202ENST00000505798 471 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AL132655.2-201ENST00000596276 594 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ENPP7P14-201ENST00000621765 1040 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 CU634019.7-201ENST00000624153 1185 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 FP236241.2-201ENST00000624906 1185 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 KRT8P28-201ENST00000433288 1390 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 AC005562.1-201ENST00000583030 3219 ntBASIC13.83□□□□□ -0.2
VAPAQ9P0L0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VAPAQ9P0L0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 LINC02486-201ENST00000604157 3000 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms