Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 AL137783.1-201ENST00000623494 1896 ntBASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 AC005829.1-201ENST00000570002 483 ntBASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 AC000095.1-201ENST00000603208 874 ntBASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 GRAMD4P3-201ENST00000621665 1669 ntBASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CR383656.2-201ENST00000548656 2254 ntBASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC9.85□□□□□ -0.83
SND1-IT1Q9HBX3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms