Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MIR1909-201ENST00000411312 80 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 BCRP2-202ENST00000447763 634 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AC022210.1-201ENST00000449856 793 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 BCRP6-201ENST00000510112 632 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 BCRP7-201ENST00000511549 544 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AP001582.1-201ENST00000525856 295 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MIR6805-201ENST00000615055 62 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AL354702.1-201ENST00000442006 1960 ntBASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 AC093433.1-201ENST00000458048 571 ntBASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 AP001889.1-201ENST00000525414 633 ntBASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 AC025181.2-201ENST00000606994 802 ntBASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 AL022328.1-201ENST00000610050 478 ntBASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 MSTO2P-201ENST00000314835 1709 ntBASIC13.87□□□□□ -0.19
TUBA1CQ9BQE3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms