Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 FAM197Y7-201ENST00000432892 766 ntBASIC13.29□□□□□ -0.28
USB1Q9BQ65 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 DUX4L47-201ENST00000566374 394 ntBASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC034229.4-201ENST00000607861 441 ntBASIC13.29□□□□□ -0.28
USB1Q9BQ65 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC097478.2-201ENST00000610572 514 ntBASIC13.29□□□□□ -0.28
USB1Q9BQ65 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 AC244669.2-201ENST00000612320 853 ntBASIC13.29□□□□□ -0.28
USB1Q9BQ65 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
USB1Q9BQ65 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
USB1Q9BQ65 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AC148477.4-201ENST00000613430 1793 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 POM121L4P-202ENST00000427789 1891 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 BRWD1P1-201ENST00000401091 371 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 BNIP3P42-201ENST00000454982 569 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 BNIP3P29-201ENST00000598302 571 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AC011447.5-201ENST00000616168 564 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 AC090616.6-203ENST00000579186 1945 ntBASIC13.28□□□□□ -0.28
USB1Q9BQ65 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
USB1Q9BQ65 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
USB1Q9BQ65 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms