Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.17□□□□□ -0.62
VGLL1Q99990 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.17□□□□□ -0.62
VGLL1Q99990 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 AC138649.4-201ENST00000612222 287 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 AC011498.7-201ENST00000624986 2027 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 AC003102.2-201ENST00000589195 1469 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 AC015688.4-201ENST00000580780 1647 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
VGLL1Q99990 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 TCAM1P-207ENST00000485295 1537 ntBASIC11.16□□□□□ -0.62
VGLL1Q99990 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 PPT1-213ENST00000641319 2388 ntBASIC11.16□□□□□ -0.62
VGLL1Q99990 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
VGLL1Q99990 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 C1QBPP1-201ENST00000400117 770 ntBASIC11.16□□□□□ -0.62
VGLL1Q99990 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.16□□□□□ -0.62
VGLL1Q99990 KLF2P2-201ENST00000416807 1039 ntBASIC11.16□□□□□ -0.62
VGLL1Q99990 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC114812.1-204ENST00000449669 728 ntBASIC11.16□□□□□ -0.62
VGLL1Q99990 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.16□□□□□ -0.62
VGLL1Q99990 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.16□□□□□ -0.62
VGLL1Q99990 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
VGLL1Q99990 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VGLL1Q99990 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 AC215219.1-201ENST00000400706 1817 ntBASIC11.16□□□□□ -0.62
VGLL1Q99990 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
VGLL1Q99990 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms