Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS3Q969F9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.17■□□□□ 0.18
HPS3Q969F9 AC079316.1-201ENST00000548397 411 ntBASIC16.17■□□□□ 0.18
HPS3Q969F9 DUX4L46-201ENST00000566845 751 ntBASIC16.17■□□□□ 0.18
HPS3Q969F9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS3Q969F9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS3Q969F9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS3Q969F9 AC133552.6-201ENST00000613406 534 ntBASIC16.17■□□□□ 0.18
HPS3Q969F9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HPS3Q969F9 AC009093.10-201ENST00000641956 1442 ntBASIC16.17■□□□□ 0.18
HPS3Q969F9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS3Q969F9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS3Q969F9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS3Q969F9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS3Q969F9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS3Q969F9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS3Q969F9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HPS3Q969F9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 AL157996.1-201ENST00000624684 2299 ntBASIC16.16■□□□□ 0.18
HPS3Q969F9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HPS3Q969F9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.16■□□□□ 0.18
HPS3Q969F9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.16■□□□□ 0.18
HPS3Q969F9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 AC027237.1-201ENST00000560942 655 ntBASIC16.16■□□□□ 0.18
HPS3Q969F9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 AC008825.2-201ENST00000603374 718 ntBASIC16.16■□□□□ 0.18
HPS3Q969F9 AC017083.2-201ENST00000608069 979 ntBASIC16.16■□□□□ 0.18
HPS3Q969F9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 AL008718.2-201ENST00000609206 1313 ntBASIC16.16■□□□□ 0.18
HPS3Q969F9 AL022313.4-201ENST00000562756 2046 ntBASIC16.16■□□□□ 0.18
HPS3Q969F9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS3Q969F9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HPS3Q969F9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.16■□□□□ 0.18
HPS3Q969F9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HPS3Q969F9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS3Q969F9 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HPS3Q969F9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 AL161932.2-201ENST00000435436 679 ntBASIC16.15■□□□□ 0.18
HPS3Q969F9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS3Q969F9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.15■□□□□ 0.18
HPS3Q969F9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS3Q969F9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS3Q969F9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS3Q969F9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS3Q969F9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS3Q969F9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS3Q969F9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS3Q969F9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HPS3Q969F9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HPS3Q969F9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS3Q969F9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS3Q969F9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS3Q969F9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS3Q969F9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS3Q969F9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms