Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 AL132994.1-201ENST00000554098 400 ntBASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 RN7SL455P-201ENST00000580629 282 ntBASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 AL139339.2-201ENST00000608063 657 ntBASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KLHDC9Q8NEP7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 OR7E115P-201ENST00000382617 1024 ntBASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ACTBP7-201ENST00000418351 1124 ntBASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ALG1L3P-201ENST00000503331 765 ntBASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KLHDC9Q8NEP7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 RPL13AP3-202ENST00000494676 1473 ntBASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 STK24P1-201ENST00000455035 1291 ntBASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC025186.1-201ENST00000478174 870 ntBASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC083801.1-201ENST00000491689 358 ntBASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 KRT18P37-201ENST00000520711 1282 ntBASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.78■□□□□ 0.12
KLHDC9Q8NEP7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms