Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC105917.1-201ENST00000506637 2539 ntBASIC17.79■□□□□ 0.44
DDR1Q08345 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.79■□□□□ 0.44
DDR1Q08345 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDR1Q08345 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.79■□□□□ 0.44
DDR1Q08345 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 AC091951.1-201ENST00000512854 2465 ntBASIC17.78■□□□□ 0.44
DDR1Q08345 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 AF274858.1-201ENST00000406288 372 ntBASIC17.78■□□□□ 0.44
DDR1Q08345 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 AL512599.1-201ENST00000430724 685 ntBASIC17.78■□□□□ 0.44
DDR1Q08345 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.78■□□□□ 0.44
DDR1Q08345 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 SERBP1P2-201ENST00000436888 1164 ntBASIC17.78■□□□□ 0.44
DDR1Q08345 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.78■□□□□ 0.44
DDR1Q08345 SORD2P-201ENST00000558556 1069 ntBASIC17.78■□□□□ 0.44
DDR1Q08345 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.78■□□□□ 0.44
DDR1Q08345 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.78■□□□□ 0.44
DDR1Q08345 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.78■□□□□ 0.44
DDR1Q08345 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDR1Q08345 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.78■□□□□ 0.44
DDR1Q08345 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.78■□□□□ 0.44
DDR1Q08345 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 OR10N1P-201ENST00000392758 869 ntBASIC17.77■□□□□ 0.44
DDR1Q08345 AP000354.1-201ENST00000396982 456 ntBASIC17.77■□□□□ 0.44
DDR1Q08345 AC092570.1-201ENST00000414446 469 ntBASIC17.77■□□□□ 0.44
DDR1Q08345 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.77■□□□□ 0.44
DDR1Q08345 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.77■□□□□ 0.44
DDR1Q08345 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.77■□□□□ 0.44
DDR1Q08345 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
DDR1Q08345 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.77■□□□□ 0.44
DDR1Q08345 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
DDR1Q08345 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 MIR6816-201ENST00000620368 66 ntBASIC17.77■□□□□ 0.44
DDR1Q08345 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.77■□□□□ 0.44
DDR1Q08345 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.77■□□□□ 0.44
DDR1Q08345 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDR1Q08345 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms