Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 MIR8072-201ENST00000614241 80 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 AC004241.5-201ENST00000623870 2448 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
EPHA3P29320 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
EPHA3P29320 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
EPHA3P29320 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.27□□□□□ -0.12
EPHA3P29320 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
EPHA3P29320 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.27□□□□□ -0.12
EPHA3P29320 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
EPHA3P29320 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EPHA3P29320 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.27□□□□□ -0.13
EPHA3P29320 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 SPDYE19P-201ENST00000338590 713 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA3P29320 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
EPHA3P29320 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.27□□□□□ -0.13
EPHA3P29320 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.27□□□□□ -0.13
EPHA3P29320 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.27□□□□□ -0.13
EPHA3P29320 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.27□□□□□ -0.13
EPHA3P29320 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.27□□□□□ -0.13
EPHA3P29320 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 SORD2P-201ENST00000558556 1069 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 AC124283.3-201ENST00000570869 594 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.27□□□□□ -0.13
EPHA3P29320 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.27□□□□□ -0.13
EPHA3P29320 AP001002.3-201ENST00000623482 206 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 AL122018.1-201ENST00000446607 2310 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
EPHA3P29320 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.27□□□□□ -0.13
EPHA3P29320 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA3P29320 LINC02486-201ENST00000604157 3000 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
EPHA3P29320 AL591122.2-201ENST00000624125 1853 ntBASIC14.27□□□□□ -0.13
EPHA3P29320 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.27□□□□□ -0.13
EPHA3P29320 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
EPHA3P29320 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
EPHA3P29320 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
EPHA3P29320 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EPHA3P29320 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.26□□□□□ -0.13
EPHA3P29320 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EPHA3P29320 AC114271.1-201ENST00000612689 2813 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 TUBB8P4-201ENST00000511806 1324 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 AC004899.2-201ENST00000622993 3860 ntBASIC14.26□□□□□ -0.13
EPHA3P29320 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EPHA3P29320 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms