Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC022748.3-201ENST00000621828 275 ntBASIC13.48□□□□□ -0.25
ABCD3P28288 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 BX640514.1-201ENST00000583223 1918 ntBASIC13.48□□□□□ -0.25
ABCD3P28288 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
ABCD3P28288 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
ABCD3P28288 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCD3P28288 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ABCD3P28288 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ABCD3P28288 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCD3P28288 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.48□□□□□ -0.25
ABCD3P28288 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ABCD3P28288 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.47□□□□□ -0.25
ABCD3P28288 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ABCD3P28288 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 AC006033.1-201ENST00000440505 426 ntBASIC13.47□□□□□ -0.25
ABCD3P28288 AC004898.1-201ENST00000451057 766 ntBASIC13.47□□□□□ -0.25
ABCD3P28288 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 RPL18P13-201ENST00000478088 569 ntBASIC13.47□□□□□ -0.25
ABCD3P28288 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.47□□□□□ -0.25
ABCD3P28288 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.47□□□□□ -0.25
ABCD3P28288 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ABCD3P28288 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.47□□□□□ -0.25
ABCD3P28288 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
ABCD3P28288 MBLAC2-202ENST00000514906 1936 ntBASIC13.47□□□□□ -0.25
ABCD3P28288 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ABCD3P28288 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ABCD3P28288 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.46□□□□□ -0.25
ABCD3P28288 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ABCD3P28288 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms