Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.88□□□□□ -0.03
NFKB1P19838 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.88□□□□□ -0.03
NFKB1P19838 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.88□□□□□ -0.03
NFKB1P19838 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.88□□□□□ -0.03
NFKB1P19838 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
NFKB1P19838 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 AL023775.1-201ENST00000454907 1746 ntBASIC14.88□□□□□ -0.03
NFKB1P19838 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.88□□□□□ -0.03
NFKB1P19838 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NFKB1P19838 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NFKB1P19838 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.87□□□□□ -0.03
NFKB1P19838 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.87□□□□□ -0.03
NFKB1P19838 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.87□□□□□ -0.03
NFKB1P19838 AC099336.1-201ENST00000417053 1171 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 HLA-V-201ENST00000429037 534 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 GPR53P-205ENST00000457298 1084 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.87□□□□□ -0.03
NFKB1P19838 AC017007.3-201ENST00000479865 435 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 AC100850.1-201ENST00000506768 649 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.87□□□□□ -0.03
NFKB1P19838 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.87□□□□□ -0.03
NFKB1P19838 AC132192.2-201ENST00000596206 1147 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.87□□□□□ -0.03
NFKB1P19838 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 AC005840.4-201ENST00000541242 2494 ntBASIC14.87□□□□□ -0.03
NFKB1P19838 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NFKB1P19838 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
NFKB1P19838 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NFKB1P19838 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NFKB1P19838 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NFKB1P19838 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
NFKB1P19838 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.86□□□□□ -0.03
NFKB1P19838 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.86□□□□□ -0.03
NFKB1P19838 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.86□□□□□ -0.03
NFKB1P19838 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms