Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR1AO95602 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1AO95602 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
POLR1AO95602 GAS5-209ENST00000430245 723 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1AO95602 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR1AO95602 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1AO95602 AC080013.5-201ENST00000607044 679 ntBASIC20.61■□□□□ 0.89
POLR1AO95602 MIR6074-201ENST00000612054 107 ntBASIC20.61■□□□□ 0.89
POLR1AO95602 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 AC139712.1-201ENST00000378256 1875 ntBASIC20.61■□□□□ 0.89
POLR1AO95602 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR1AO95602 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.61■□□□□ 0.89
POLR1AO95602 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 AC136604.1-202ENST00000425471 771 ntBASIC20.61■□□□□ 0.89
POLR1AO95602 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
POLR1AO95602 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1AO95602 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1AO95602 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC20.61■□□□□ 0.89
POLR1AO95602 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1AO95602 KLF17P1-201ENST00000547105 1126 ntBASIC20.61■□□□□ 0.89
POLR1AO95602 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1AO95602 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR1AO95602 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR1AO95602 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1AO95602 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
POLR1AO95602 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR1AO95602 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
POLR1AO95602 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
POLR1AO95602 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLR1AO95602 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
POLR1AO95602 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR1AO95602 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
POLR1AO95602 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR1AO95602 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLR1AO95602 RN7SL832P-201ENST00000607781 1756 ntBASIC20.6■□□□□ 0.89
POLR1AO95602 AC092570.1-201ENST00000414446 469 ntBASIC20.6■□□□□ 0.89
POLR1AO95602 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
POLR1AO95602 RNLS-203ENST00000437752 525 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 IGKV1OR-2-201ENST00000457995 350 ntBASIC20.6■□□□□ 0.89
POLR1AO95602 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.6■□□□□ 0.89
POLR1AO95602 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC20.6■□□□□ 0.89
POLR1AO95602 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR1AO95602 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLR1AO95602 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1AO95602 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 FKBP4P8-201ENST00000610931 1369 ntBASIC20.6■□□□□ 0.89
POLR1AO95602 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
POLR1AO95602 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
POLR1AO95602 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 AC152010.1-201ENST00000415779 2006 ntBASIC20.59■□□□□ 0.89
POLR1AO95602 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
POLR1AO95602 AC022080.1-201ENST00000366255 781 ntBASIC20.59■□□□□ 0.89
POLR1AO95602 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR1AO95602 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR1AO95602 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.59■□□□□ 0.89
POLR1AO95602 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR1AO95602 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 AL353622.2-201ENST00000605846 425 ntBASIC20.59■□□□□ 0.89
POLR1AO95602 GGNBP1-204ENST00000613113 887 ntBASIC20.59■□□□□ 0.89
POLR1AO95602 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
POLR1AO95602 AC019109.1-201ENST00000401725 1874 ntBASIC20.59■□□□□ 0.89
POLR1AO95602 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR1AO95602 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
POLR1AO95602 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1AO95602 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms