Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TMEM261P1-201ENST00000604899 340 ntBASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 MIR8072-201ENST00000614241 80 ntBASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AMBRA1Q9C0C7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AC011498.7-201ENST00000624986 2027 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AC215219.1-201ENST00000400706 1817 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 C1QBPP1-201ENST00000400117 770 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 KLF2P2-201ENST00000416807 1039 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AC123567.1-201ENST00000548294 1261 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AL603764.1-201ENST00000636452 321 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AC072061.1-201ENST00000569710 2234 ntBASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AMBRA1Q9C0C7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 HSPA8P5-201ENST00000456928 2069 ntBASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 AC015688.4-201ENST00000580780 1647 ntBASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
AMBRA1Q9C0C7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms