Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 POM121L14P-201ENST00000406100 1558 ntBASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GABARAPL3Q9BY60 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 C1QBPP1-201ENST00000400117 770 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC134915.1-201ENST00000426461 574 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC112482.1-201ENST00000492080 688 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 MIR497HG-202ENST00000572453 3838 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC010327.4-202ENST00000591484 748 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AL390955.2-201ENST00000603032 514 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AL671883.3-201ENST00000603274 991 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 AP000437.1-201ENST00000624057 2085 ntBASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.3□□□□□ -0.28
GABARAPL3Q9BY60 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 AL022342.1-201ENST00000400363 863 ntBASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 RPSAP43-201ENST00000402237 625 ntBASIC13.29□□□□□ -0.28
GABARAPL3Q9BY60 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms