Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.41□□□□□ -0.42
HDHD3Q9BSH5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 DGCR9-201ENST00000609630 2415 ntBASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 MEX3B-202ENST00000558133 4333 ntBASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HDHD3Q9BSH5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.4□□□□□ -0.43
HDHD3Q9BSH5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
HDHD3Q9BSH5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
HDHD3Q9BSH5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 KRT8P35-201ENST00000483942 1338 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 MIR497HG-202ENST00000572453 3838 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 LINC02486-201ENST00000604157 3000 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AL365181.3-201ENST00000605886 3222 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 UGT1A2P-201ENST00000454886 866 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AC103988.2-201ENST00000561804 725 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 CLUHP6-201ENST00000580789 941 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AC133539.2-201ENST00000604757 467 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AC139712.1-201ENST00000378256 1875 ntBASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HDHD3Q9BSH5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms