Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAB40CQ96S21 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
RAB40CQ96S21 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 AL157996.1-201ENST00000624684 2299 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 AC069262.1-201ENST00000539058 672 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TEX28P1-201ENST00000613479 1221 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 TEX28P2-201ENST00000617764 1221 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 PRSS30P-206ENST00000641773 873 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 DRD5P1-201ENST00000456605 1438 ntBASIC11.92□□□□□ -0.5
RAB40CQ96S21 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB40CQ96S21 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB40CQ96S21 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AL139400.1-201ENST00000366220 510 ntBASIC11.91□□□□□ -0.5
RAB40CQ96S21 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AC022616.1-201ENST00000518688 554 ntBASIC11.91□□□□□ -0.5
RAB40CQ96S21 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AC109322.1-201ENST00000524499 1264 ntBASIC11.91□□□□□ -0.5
RAB40CQ96S21 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RAB40CQ96S21 AC107373.2-201ENST00000607735 490 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms