Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 AC020910.5-201ENST00000623668 1865 ntBASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC170Q8IYT3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ARSEP1-201ENST00000420443 635 ntBASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC170Q8IYT3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AC068760.1-201ENST00000493579 1953 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 POM121L8P-201ENST00000417732 1281 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 POM121L9P-203ENST00000441984 1285 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AC022137.2-201ENST00000503482 481 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AC027237.1-201ENST00000560942 655 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 CLUHP6-201ENST00000580789 941 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AC104506.1-201ENST00000609247 429 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 AC138466.3-201ENST00000619983 221 ntBASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms