Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 DFFBP1-201ENST00000433250 979 ntBASIC14.8□□□□□ -0.04
RAPH1Q70E73 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 KRT18P25-201ENST00000508931 1278 ntBASIC14.8□□□□□ -0.04
RAPH1Q70E73 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.8□□□□□ -0.04
RAPH1Q70E73 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAPH1Q70E73 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAPH1Q70E73 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 Z82170.1-201ENST00000625081 3192 ntBASIC14.79□□□□□ -0.04
RAPH1Q70E73 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC090505.1-201ENST00000430515 1834 ntBASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 RFPL4AP1-201ENST00000530883 850 ntBASIC14.79□□□□□ -0.04
RAPH1Q70E73 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC007541.1-201ENST00000570282 1469 ntBASIC14.79□□□□□ -0.04
RAPH1Q70E73 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC015688.4-201ENST00000580780 1647 ntBASIC14.79□□□□□ -0.04
RAPH1Q70E73 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC016397.2-201ENST00000624848 1985 ntBASIC14.79□□□□□ -0.04
RAPH1Q70E73 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.79□□□□□ -0.04
RAPH1Q70E73 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAPH1Q70E73 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.78□□□□□ -0.04
RAPH1Q70E73 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAPH1Q70E73 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms