Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 AC010531.8-201ENST00000623341 685 ntBASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPAQ5VT25 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 DDC-204ENST00000426377 1700 ntTSL 3 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 UROS-201ENST00000368774 744 ntTSL 2 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 AC092570.1-201ENST00000414446 469 ntBASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 AC136604.1-202ENST00000425471 771 ntBASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPAQ5VT25 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDC42BPAQ5VT25 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 AC104961.1-201ENST00000427605 771 ntBASIC21.32■■□□□ 1
CDC42BPAQ5VT25 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 ANKRD26P1-203ENST00000569528 966 ntBASIC21.32■■□□□ 1
CDC42BPAQ5VT25 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 URAHP-205ENST00000610227 398 ntBASIC21.32■■□□□ 1
CDC42BPAQ5VT25 AC026120.2-201ENST00000617239 309 ntBASIC21.32■■□□□ 1
CDC42BPAQ5VT25 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 SNORA57-201ENST00000383870 149 ntBASIC21.32■■□□□ 1
CDC42BPAQ5VT25 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 ENPP7P8-202ENST00000527856 1345 ntBASIC21.32■■□□□ 1
CDC42BPAQ5VT25 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPAQ5VT25 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 FAM187B2P-201ENST00000577135 713 ntBASIC21.31■■□□□ 1
CDC42BPAQ5VT25 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC21.31■■□□□ 1
CDC42BPAQ5VT25 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 MPI-203ENST00000535694 1523 ntTSL 2 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.31■■□□□ 1
CDC42BPAQ5VT25 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms