Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC019294.4-201ENST00000561777 2905 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 KHSRPP1-201ENST00000427983 1768 ntBASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 EIF3FP3-201ENST00000434851 1086 ntBASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 GCOM2-201ENST00000509133 1104 ntBASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 SPDYE22P-201ENST00000582158 798 ntBASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AL158211.3-201ENST00000607385 239 ntBASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AL138725.1-201ENST00000407347 1314 ntBASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00242Q5T6M2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00242Q5T6M2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms