Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 IMP3P2-201ENST00000489760 475 ntBASIC12.59□□□□□ -0.39
CD40P25942 POU5F1P2-201ENST00000521750 823 ntBASIC12.59□□□□□ -0.39
CD40P25942 AC003686.1-201ENST00000550956 1034 ntBASIC12.59□□□□□ -0.39
CD40P25942 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CD40P25942 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 RN7SL574P-201ENST00000581512 297 ntBASIC12.59□□□□□ -0.39
CD40P25942 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 MTHFR-210ENST00000641407 2387 ntBASIC12.59□□□□□ -0.39
CD40P25942 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 DBET-201ENST00000630918 3363 ntBASIC12.59□□□□□ -0.39
CD40P25942 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CD40P25942 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.59□□□□□ -0.39
CD40P25942 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD40P25942 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CD40P25942 AC103702.1-201ENST00000548801 2630 ntBASIC12.58□□□□□ -0.39
CD40P25942 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CD40P25942 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CD40P25942 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD40P25942 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD40P25942 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD40P25942 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CD40P25942 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CD40P25942 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CD40P25942 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 AC105129.2-201ENST00000559536 390 ntBASIC12.58□□□□□ -0.4
CD40P25942 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 FGFR3P5-201ENST00000564496 886 ntBASIC12.58□□□□□ -0.4
CD40P25942 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.58□□□□□ -0.4
CD40P25942 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 AC084346.2-201ENST00000607097 949 ntBASIC12.58□□□□□ -0.4
CD40P25942 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.58□□□□□ -0.4
CD40P25942 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CD40P25942 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.58□□□□□ -0.4
CD40P25942 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms