Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC17.7■□□□□ 0.42
RGPD3A6NKT7 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC17.7■□□□□ 0.42
RGPD3A6NKT7 AL137028.2-201ENST00000614601 256 ntBASIC17.7■□□□□ 0.42
RGPD3A6NKT7 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RGPD3A6NKT7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.7■□□□□ 0.42
RGPD3A6NKT7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.7■□□□□ 0.42
RGPD3A6NKT7 PTN-202ENST00000393083 1599 ntTSL 5 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 RN7SL33P-201ENST00000462543 342 ntBASIC17.69■□□□□ 0.42
RGPD3A6NKT7 RN7SL794P-201ENST00000469816 280 ntBASIC17.69■□□□□ 0.42
RGPD3A6NKT7 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 AC068760.1-201ENST00000493579 1953 ntBASIC17.69■□□□□ 0.42
RGPD3A6NKT7 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 AC232323.1-201ENST00000540724 2099 ntBASIC17.69■□□□□ 0.42
RGPD3A6NKT7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 SFPQP1-201ENST00000446621 1786 ntBASIC17.69■□□□□ 0.42
RGPD3A6NKT7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RGPD3A6NKT7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 PPP1R2P10-201ENST00000393023 595 ntBASIC17.68■□□□□ 0.42
RGPD3A6NKT7 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC008021.1-201ENST00000474180 414 ntBASIC17.68■□□□□ 0.42
RGPD3A6NKT7 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC148476.1-201ENST00000622182 705 ntBASIC17.68■□□□□ 0.42
RGPD3A6NKT7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC022121.1-201ENST00000484584 579 ntBASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 MIR4326-201ENST00000582203 59 ntBASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AC015912.3-201ENST00000619432 348 ntBASIC17.68■□□□□ 0.42
RGPD3A6NKT7 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RGPD3A6NKT7 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 RBPMSLP-201ENST00000433427 502 ntBASIC17.67■□□□□ 0.42
RGPD3A6NKT7 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 DUX4L31-201ENST00000446466 1136 ntBASIC17.67■□□□□ 0.42
RGPD3A6NKT7 HNRNPA1P73-201ENST00000446472 928 ntBASIC17.67■□□□□ 0.42
RGPD3A6NKT7 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 RN7SL87P-201ENST00000497657 288 ntBASIC17.67■□□□□ 0.42
RGPD3A6NKT7 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
RGPD3A6NKT7 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms