Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 KRT8P34-201ENST00000577607 1044 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AC087072.1-201ENST00000603727 421 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AC112220.4-201ENST00000604982 1263 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AC117503.4-201ENST00000623229 1418 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AL121753.2-201ENST00000624581 1461 ntBASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM88BA6NKF7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 AC093106.1-201ENST00000437271 352 ntBASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 HNRNPA1P10-201ENST00000444945 962 ntBASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 RN7SL523P-201ENST00000484401 298 ntBASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 TPST2P1-201ENST00000564073 1102 ntBASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TMEM88BA6NKF7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 ACTBP14-201ENST00000411655 1089 ntBASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM88BA6NKF7 RN7SL363P-201ENST00000482412 273 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms