Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 GNRHR2-203ENST00000581100 1187 ntBASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 AC083964.2-201ENST00000623988 2396 ntBASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AC009093.2-202ENST00000620513 2079 ntBASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AC025048.6-201ENST00000634326 1161 ntBASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF11Q9Y3C5 AC019294.4-201ENST00000561777 2905 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 AC015909.5-201ENST00000624336 2266 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 AC015818.8-201ENST00000587907 1519 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 AC016397.2-201ENST00000624848 1985 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 AC011498.7-201ENST00000624986 2027 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 TPM3P8-201ENST00000330554 643 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 AC098614.1-201ENST00000368528 745 ntBASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF11Q9Y3C5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms