Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.71□□□□□ -0.06
VPS9D1Q9Y2B5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS9D1Q9Y2B5 C8orf49-201ENST00000525043 1968 ntBASIC14.71□□□□□ -0.06
VPS9D1Q9Y2B5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS9D1Q9Y2B5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS9D1Q9Y2B5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS9D1Q9Y2B5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 ST20-AS1-201ENST00000560255 4223 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 MTND1P26-201ENST00000440488 538 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC012454.1-201ENST00000443948 995 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AL391280.1-201ENST00000506969 1062 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC005520.3-201ENST00000602874 370 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC008825.2-201ENST00000603374 718 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 ECM1P1-201ENST00000604092 1279 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AL157392.4-201ENST00000609756 345 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AC006453.4-201ENST00000636949 1252 ntBASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS9D1Q9Y2B5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AC020910.5-201ENST00000623668 1865 ntBASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS9D1Q9Y2B5 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms