Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LHX6Q9UPM6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 MTHFR-217ENST00000641820 1569 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 CAP2P1-201ENST00000557743 1390 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 GHSR-202ENST00000427970 912 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 CHMP1AP1-201ENST00000445563 662 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 RCC2P8-201ENST00000502779 1035 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NREP-217ENST00000509025 987 ntTSL 3 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 PTS-202ENST00000524931 696 ntTSL 3 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 PTS-204ENST00000525803 625 ntTSL 3 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AL392048.1-201ENST00000613946 534 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AC105137.3-201ENST00000617588 984 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AC073592.2-201ENST00000623062 780 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AP000842.4-201ENST00000638781 748 ntBASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LHX6Q9UPM6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 FAM90A2P-201ENST00000511144 1395 ntBASIC14.12□□□□□ -0.15
LHX6Q9UPM6 FAM90A25P-201ENST00000528404 1395 ntBASIC14.12□□□□□ -0.15
LHX6Q9UPM6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 BAK1P1-201ENST00000317045 636 ntBASIC14.12□□□□□ -0.15
LHX6Q9UPM6 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 SETP10-201ENST00000424368 814 ntBASIC14.12□□□□□ -0.15
LHX6Q9UPM6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.12□□□□□ -0.15
LHX6Q9UPM6 RPL18AP3-201ENST00000462885 528 ntBASIC14.12□□□□□ -0.15
LHX6Q9UPM6 AC026410.1-201ENST00000507366 1101 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms