Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 MRPL37P1-201ENST00000592451 1337 ntBASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.33■□□□□ 0.04
PPARGC1AQ9UBK2 AC010327.5-201ENST00000586923 3061 ntBASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AC092135.3-201ENST00000624151 1846 ntBASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AP006547.1-201ENST00000563435 692 ntBASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 MIR4683-201ENST00000579659 81 ntBASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AL008721.1-201ENST00000609964 604 ntBASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 KRT8P4-201ENST00000509735 1454 ntBASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PPARGC1AQ9UBK2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AC097359.2-201ENST00000604992 2389 ntBASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AL583810.1-201ENST00000553344 1045 ntBASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.31■□□□□ 0.04
PPARGC1AQ9UBK2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms