Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 CLUHP6-201ENST00000580789 941 ntBASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 AC005498.2-205ENST00000593218 784 ntBASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PHACTR1Q9C0D0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 KRT8P28-201ENST00000433288 1390 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 AL161932.2-201ENST00000435436 679 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 FTLP10-202ENST00000505798 471 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 RNA5SP421-201ENST00000516864 134 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 RN7SL48P-201ENST00000579283 293 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 AC009093.10-201ENST00000641956 1442 ntBASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PHACTR1Q9C0D0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 AC111170.3-201ENST00000624282 2464 ntBASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHACTR1Q9C0D0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms