Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PUDPP3-201ENST00000445368 636 ntBASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AL035414.1-201ENST00000451327 857 ntBASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 SERPINA13P-202ENST00000478994 924 ntBASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AC009955.4-201ENST00000597192 544 ntBASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 AL136172.1-201ENST00000598590 1394 ntBASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 E2F3P2-201ENST00000447755 1422 ntBASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SSBP3Q9BWW4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 AC018735.1-201ENST00000437208 1502 ntBASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 AL133338.1-201ENST00000565695 1517 ntBASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.27□□□□□ -0.44
SSBP3Q9BWW4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC005740.2-201ENST00000511085 419 ntBASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 SCARNA20.5-201ENST00000516991 142 ntBASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC132192.2-201ENST00000596206 1147 ntBASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AL162426.1-201ENST00000624141 743 ntBASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms