Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 AC067931.2-201ENST00000623655 2003 ntBASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHROOM1Q2M3G4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 MARK2P16-201ENST00000605714 1723 ntBASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC073869.2-201ENST00000417338 1026 ntBASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AP001065.2-201ENST00000617205 644 ntBASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 AP001184.1-201ENST00000637936 376 ntBASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHROOM1Q2M3G4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SHROOM1Q2M3G4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SHROOM1Q2M3G4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TNRC18P2-201ENST00000417666 2714 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 MIR645-201ENST00000385283 94 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AL161932.2-201ENST00000435436 679 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AC079112.1-201ENST00000454972 939 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SORD2P-201ENST00000558556 1069 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 DNM1P30-201ENST00000563586 452 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AC090386.2-201ENST00000623010 1039 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 AP001267.2-201ENST00000532619 2086 ntBASIC16.89■□□□□ 0.29
SHROOM1Q2M3G4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms