Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.03□□□□□ -0.48
SPCS3P61009 AC109322.1-201ENST00000524499 1264 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 AC092865.5-201ENST00000545435 363 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 AC093813.1-201ENST00000605066 256 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 AC027612.4-201ENST00000605371 583 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 AL391069.4-201ENST00000609583 481 ntBASIC12.03□□□□□ -0.48
SPCS3P61009 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SPCS3P61009 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SPCS3P61009 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS3P61009 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS3P61009 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.02□□□□□ -0.48
SPCS3P61009 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.02□□□□□ -0.48
SPCS3P61009 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS3P61009 CLK3P2-201ENST00000427566 1453 ntBASIC12.02□□□□□ -0.48
SPCS3P61009 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS3P61009 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS3P61009 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.02□□□□□ -0.48
SPCS3P61009 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS3P61009 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS3P61009 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
SPCS3P61009 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.48
SPCS3P61009 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 KRT8P24-201ENST00000560290 1559 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SPCS3P61009 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
SPCS3P61009 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 FAM86LP-201ENST00000478302 853 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 RPL13AP25-201ENST00000484130 612 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 AC067863.1-201ENST00000494933 530 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.02□□□□□ -0.49
SPCS3P61009 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SPCS3P61009 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.02□□□□□ -0.49
SPCS3P61009 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 AC092364.2-202ENST00000597012 1073 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 PRSS30P-206ENST00000641773 873 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.02□□□□□ -0.49
SPCS3P61009 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
SPCS3P61009 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS3P61009 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS3P61009 AC020910.6-201ENST00000623084 1459 ntBASIC12.02□□□□□ -0.49
SPCS3P61009 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms