Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ECM1P1-201ENST00000604092 1279 ntBASIC13.69□□□□□ -0.22
PER3P56645 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.69□□□□□ -0.22
PER3P56645 MIR7845-201ENST00000618396 99 ntBASIC13.69□□□□□ -0.22
PER3P56645 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.69□□□□□ -0.22
PER3P56645 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PER3P56645 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 AJ011931.1-201ENST00000618749 2492 ntBASIC13.69□□□□□ -0.22
PER3P56645 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PER3P56645 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PER3P56645 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.69□□□□□ -0.22
PER3P56645 AC067750.1-201ENST00000608826 6545 ntBASIC13.69□□□□□ -0.22
PER3P56645 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.69□□□□□ -0.22
PER3P56645 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 AC148477.4-201ENST00000613430 1793 ntBASIC13.68□□□□□ -0.22
PER3P56645 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 AC092053.3-201ENST00000641308 4975 ntBASIC13.68□□□□□ -0.22
PER3P56645 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 AC099521.3-201ENST00000624251 2938 ntBASIC13.68□□□□□ -0.22
PER3P56645 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PER3P56645 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PER3P56645 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 AC084364.1-201ENST00000551967 1556 ntBASIC13.68□□□□□ -0.22
PER3P56645 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.68□□□□□ -0.22
PER3P56645 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.68□□□□□ -0.22
PER3P56645 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 SERPINA13P-202ENST00000478994 924 ntBASIC13.68□□□□□ -0.22
PER3P56645 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.68□□□□□ -0.22
PER3P56645 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.68□□□□□ -0.22
PER3P56645 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.68□□□□□ -0.22
PER3P56645 SPCS2P2-201ENST00000603270 608 ntBASIC13.68□□□□□ -0.22
PER3P56645 U62317.3-201ENST00000608319 855 ntBASIC13.68□□□□□ -0.22
PER3P56645 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PER3P56645 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PER3P56645 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 LINC01230-201ENST00000625222 3017 ntBASIC13.68□□□□□ -0.22
PER3P56645 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PER3P56645 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PER3P56645 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.67□□□□□ -0.22
PER3P56645 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PER3P56645 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms