Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 TCAM1P-207ENST00000485295 1537 ntBASIC14.38□□□□□ -0.11
CDH13P55290 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 DGCR5-201ENST00000399539 862 ntBASIC14.38□□□□□ -0.11
CDH13P55290 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
CDH13P55290 BAATP1-201ENST00000412284 1225 ntBASIC14.38□□□□□ -0.11
CDH13P55290 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH13P55290 AL391280.1-201ENST00000506969 1062 ntBASIC14.38□□□□□ -0.11
CDH13P55290 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.38□□□□□ -0.11
CDH13P55290 AC190387.1-201ENST00000551683 408 ntBASIC14.38□□□□□ -0.11
CDH13P55290 ENPP7P14-201ENST00000621765 1040 ntBASIC14.38□□□□□ -0.11
CDH13P55290 AP001002.3-201ENST00000623482 206 ntBASIC14.38□□□□□ -0.11
CDH13P55290 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH13P55290 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH13P55290 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH13P55290 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH13P55290 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 KHSRPP1-201ENST00000427983 1768 ntBASIC14.37□□□□□ -0.11
CDH13P55290 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDH13P55290 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH13P55290 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH13P55290 AC012441.1-201ENST00000446669 685 ntBASIC14.37□□□□□ -0.11
CDH13P55290 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.37□□□□□ -0.11
CDH13P55290 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH13P55290 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH13P55290 AL096865.1-201ENST00000606796 927 ntBASIC14.37□□□□□ -0.11
CDH13P55290 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH13P55290 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDH13P55290 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH13P55290 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDH13P55290 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDH13P55290 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH13P55290 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH13P55290 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH13P55290 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH13P55290 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDH13P55290 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH13P55290 AL137784.3-201ENST00000623858 2288 ntBASIC14.36□□□□□ -0.11
CDH13P55290 AL138709.1-201ENST00000614840 1693 ntBASIC14.36□□□□□ -0.11
CDH13P55290 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms