Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LYPLA2P1-203ENST00000447689 696 ntBASIC15.3■□□□□ 0.04
CLCN4P51793 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN4P51793 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.3■□□□□ 0.04
CLCN4P51793 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.3■□□□□ 0.04
CLCN4P51793 AP003398.1-201ENST00000531124 318 ntBASIC15.3■□□□□ 0.04
CLCN4P51793 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN4P51793 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN4P51793 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN4P51793 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.3■□□□□ 0.04
CLCN4P51793 NUDT4P2-201ENST00000578341 546 ntBASIC15.3■□□□□ 0.04
CLCN4P51793 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN4P51793 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN4P51793 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN4P51793 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCN4P51793 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCN4P51793 AC105137.3-201ENST00000617588 984 ntBASIC15.3■□□□□ 0.04
CLCN4P51793 AL132780.4-201ENST00000624870 1135 ntBASIC15.3■□□□□ 0.04
CLCN4P51793 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN4P51793 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN4P51793 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN4P51793 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN4P51793 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN4P51793 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
CLCN4P51793 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN4P51793 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.3■□□□□ 0.04
CLCN4P51793 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 C8orf49-201ENST00000525043 1968 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 KHSRPP1-201ENST00000427983 1768 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 AP002353.1-201ENST00000528257 1599 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCN4P51793 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 HLA-DMA-203ENST00000395305 777 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN4P51793 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCN4P51793 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 RN7SL277P-201ENST00000481521 288 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 KRT8P1-201ENST00000557533 1207 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 MIR3180-2-201ENST00000581748 88 ntBASIC15.29■□□□□ 0.04
CLCN4P51793 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLCN4P51793 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN4P51793 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN4P51793 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN4P51793 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCN4P51793 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCN4P51793 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCN4P51793 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCN4P51793 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms