Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB28P51157 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB28P51157 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB28P51157 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB28P51157 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB28P51157 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
RAB28P51157 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB28P51157 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB28P51157 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB28P51157 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 AC067750.1-201ENST00000608826 6545 ntBASIC14.12□□□□□ -0.15
RAB28P51157 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB28P51157 FAM45BP-202ENST00000592932 1624 ntBASIC14.12□□□□□ -0.15
RAB28P51157 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB28P51157 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RAB28P51157 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB28P51157 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 AC104073.2-201ENST00000453737 312 ntBASIC14.12□□□□□ -0.15
RAB28P51157 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 HLA-J-204ENST00000495278 958 ntBASIC14.12□□□□□ -0.15
RAB28P51157 SCARNA21-201ENST00000517026 139 ntBASIC14.12□□□□□ -0.15
RAB28P51157 AC044849.1-201ENST00000519737 1188 ntBASIC14.12□□□□□ -0.15
RAB28P51157 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB28P51157 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 AC090164.2-201ENST00000611487 516 ntBASIC14.12□□□□□ -0.15
RAB28P51157 AC090505.1-201ENST00000430515 1834 ntBASIC14.12□□□□□ -0.15
RAB28P51157 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB28P51157 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 AC005912.2-201ENST00000619492 2400 ntBASIC14.12□□□□□ -0.15
RAB28P51157 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB28P51157 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAB28P51157 AC136759.1-202ENST00000530858 2194 ntBASIC14.12□□□□□ -0.15
RAB28P51157 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB28P51157 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB28P51157 RN7SL832P-201ENST00000607781 1756 ntBASIC14.11□□□□□ -0.15
RAB28P51157 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 BX640514.1-201ENST00000583223 1918 ntBASIC14.11□□□□□ -0.15
RAB28P51157 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB28P51157 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 FAM90A7P-201ENST00000382628 1395 ntBASIC14.11□□□□□ -0.15
RAB28P51157 FAM90A23P-201ENST00000400136 1395 ntBASIC14.11□□□□□ -0.15
RAB28P51157 AC020907.1-201ENST00000616460 1350 ntBASIC14.11□□□□□ -0.15
RAB28P51157 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB28P51157 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.11□□□□□ -0.15
RAB28P51157 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB28P51157 MIR1247-201ENST00000408206 136 ntBASIC14.11□□□□□ -0.15
RAB28P51157 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 NKAIN1P1-201ENST00000435754 582 ntBASIC14.11□□□□□ -0.15
RAB28P51157 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 KRT8P13-201ENST00000463294 1010 ntBASIC14.11□□□□□ -0.15
RAB28P51157 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB28P51157 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 CYP4F23P-201ENST00000593402 1579 ntBASIC14.11□□□□□ -0.15
RAB28P51157 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB28P51157 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.11□□□□□ -0.15
RAB28P51157 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB28P51157 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB28P51157 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
RAB28P51157 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms