Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CXCL12P48061 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CXCL12P48061 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 HLA-DPA2-205ENST00000433582 733 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 KRT18P46-201ENST00000435568 1279 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 RN7SL375P-201ENST00000492442 298 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 KRT8P2-201ENST00000556193 944 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 TRMT112P3-201ENST00000580149 358 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 AP005264.5-201ENST00000590066 467 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 AC008972.2-201ENST00000606587 494 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 CASP16P-204ENST00000635032 809 ntBASIC14.36□□□□□ -0.11
CXCL12P48061 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCL12P48061 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CXCL12P48061 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CXCL12P48061 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CXCL12P48061 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.36□□□□□ -0.11
CXCL12P48061 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
CXCL12P48061 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
CXCL12P48061 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CXCL12P48061 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CXCL12P48061 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CXCL12P48061 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.36□□□□□ -0.11
CXCL12P48061 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CXCL12P48061 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CXCL12P48061 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
CXCL12P48061 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CXCL12P48061 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
CXCL12P48061 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
CXCL12P48061 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.35□□□□□ -0.11
CXCL12P48061 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CXCL12P48061 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCL12P48061 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.35□□□□□ -0.11
CXCL12P48061 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.35□□□□□ -0.11
CXCL12P48061 ALG1L3P-201ENST00000503331 765 ntBASIC14.35□□□□□ -0.11
CXCL12P48061 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCL12P48061 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCL12P48061 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCL12P48061 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CXCL12P48061 VENTXP3-201ENST00000546480 773 ntBASIC14.35□□□□□ -0.11
CXCL12P48061 AC068831.5-201ENST00000557387 328 ntBASIC14.35□□□□□ -0.11
CXCL12P48061 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 ABHD17AP9-201ENST00000561925 548 ntBASIC14.35□□□□□ -0.11
CXCL12P48061 AC005586.2-201ENST00000563946 837 ntBASIC14.35□□□□□ -0.11
CXCL12P48061 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCL12P48061 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCL12P48061 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCL12P48061 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCL12P48061 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCL12P48061 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms