Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 AC067750.1-201ENST00000608826 6545 ntBASIC15.98■□□□□ 0.15
RFX1P22670 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RFX1P22670 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.98■□□□□ 0.15
RFX1P22670 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 AC103988.2-201ENST00000561804 725 ntBASIC15.98■□□□□ 0.15
RFX1P22670 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.98■□□□□ 0.15
RFX1P22670 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.98■□□□□ 0.15
RFX1P22670 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.98■□□□□ 0.15
RFX1P22670 U62317.3-201ENST00000608319 855 ntBASIC15.98■□□□□ 0.15
RFX1P22670 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 AC132938.4-201ENST00000623835 848 ntBASIC15.98■□□□□ 0.15
RFX1P22670 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RFX1P22670 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RFX1P22670 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX1P22670 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 AL590440.2-201ENST00000641973 1595 ntBASIC15.97■□□□□ 0.15
RFX1P22670 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX1P22670 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.97■□□□□ 0.15
RFX1P22670 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 AC006001.1-201ENST00000325130 474 ntBASIC15.97■□□□□ 0.15
RFX1P22670 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 AL133466.1-201ENST00000447582 150 ntBASIC15.97■□□□□ 0.15
RFX1P22670 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.97■□□□□ 0.15
RFX1P22670 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.97■□□□□ 0.15
RFX1P22670 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX1P22670 NDUFV2P1-201ENST00000596415 907 ntBASIC15.97■□□□□ 0.15
RFX1P22670 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 AC015818.8-201ENST00000587907 1519 ntBASIC15.97■□□□□ 0.15
RFX1P22670 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFX1P22670 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 AC139712.1-201ENST00000378256 1875 ntBASIC15.97■□□□□ 0.15
RFX1P22670 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX1P22670 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RFX1P22670 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms